Biological longitudinal aspects of the Kabompo River, a significant tributary of the upper Zambezi sub-catchment, North-west Province, Zambia
- Janse van Rensburg, Lomarie Cathleen
- Authors: Janse van Rensburg, Lomarie Cathleen
- Date: 2023-03-29
- Subjects: Nutrient cycles , Stable isotopes , Redeye Labeo , Synodontis , Zambezi River Watershed Ecology , Aquatic ecology
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/422292 , vital:71928
- Description: The landscape of the Upper Zambezi Catchment in the remote North-Western Province of Zambia retains many natural features, but current and future anthropogenic activities threaten its integrity. Lack of information relating to the basic ecological functioning of the region hampers conservation efforts. Flooding from the adjacent woody-savanna and open grasslands in the Upper-Zambezi Catchment in the wet season drives crucial processes in the aquatic ecosystems such as the Kabompo River. This thesis describes aquatic food webs and describes the nutrient cycling in this river. A general introduction was based on the seasonality, river morphology, and biodiversity of the Kabompo River. There is no aquatic food web information available on this river. To address this knowledge gap, sampling of the principal food web components– vegetation, invertebrates, and fish – were collected in the dry season from August to September 2019 across six sites in the Kabompo River. Stable isotope analyses provided proxies for the food web structure at each site, and were the basis of longitudinal comparisons. The analyses suggest that the Kabompo River food webs follow the trophic ordination and nutrient cycling characteristic of the revised-Riverine Productivity Model. Food webs and community assemblages remain structurally similar between sites and provide some evidence of bottom-up productivity-driven trophic dynamics. To predict the possible landscape-scale processing of nutrient changes present for the aquatic ecosystems of the Kabompo River, a longitudinal comparison between a herbivore, Labeo cylindricus, and omnivore, Synodontis spp., fish species and their resources (primary producers and invertebrates) was done and showed archetypal fish food web trophic separation (2 ‰ to3 ‰) between species which remains consistent for the headwater sites. The nutrient values change at the convergence between the Kabompo Bridge and the Mwinilunga branches and show a decrease in the trophic separation of the sites below. This change becomes apparent from the last site, Watopa, where the trophic separation re-establishes (2 ‰ to 3 ‰) between the species. The trend suggests primarily autochthonous production in the headwater reaches, changing to allochthonous and autochthonous nutrient incorporation after the convergence of the two main branches. Permanent wetlands surrounding the convergence zones may be conducive to more primary producer activity and increased nutrient turnover. Permanent wetlands are a common feature of the Upper Zambezi Catchment tributaries, with the most notable lentic system the Barotse Flood Plains in the south, which shares reach-adjacent characteristics with the Kabompo River. Trends from the 2015 dry season identified for the Barotse Flood Plains support the findings of this thesis, where the δ13C values recorded reach depletion of -45 ‰. Management in the Upper Zambezi Basin and the Kabompo River comprises biannual assessments of water quality and quantity by the Zambezi River Authority, but not of the ecosystem process. This thesis may provide information to address the ecological (food webs and nutrient cycling) dynamics of the Basin rivers. As the first baseline information on the river's biology and ecology, it may present a comparative basis for future assessments under conservation management strategies. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2023
- Full Text:
- Date Issued: 2023-03-29
- Authors: Janse van Rensburg, Lomarie Cathleen
- Date: 2023-03-29
- Subjects: Nutrient cycles , Stable isotopes , Redeye Labeo , Synodontis , Zambezi River Watershed Ecology , Aquatic ecology
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/422292 , vital:71928
- Description: The landscape of the Upper Zambezi Catchment in the remote North-Western Province of Zambia retains many natural features, but current and future anthropogenic activities threaten its integrity. Lack of information relating to the basic ecological functioning of the region hampers conservation efforts. Flooding from the adjacent woody-savanna and open grasslands in the Upper-Zambezi Catchment in the wet season drives crucial processes in the aquatic ecosystems such as the Kabompo River. This thesis describes aquatic food webs and describes the nutrient cycling in this river. A general introduction was based on the seasonality, river morphology, and biodiversity of the Kabompo River. There is no aquatic food web information available on this river. To address this knowledge gap, sampling of the principal food web components– vegetation, invertebrates, and fish – were collected in the dry season from August to September 2019 across six sites in the Kabompo River. Stable isotope analyses provided proxies for the food web structure at each site, and were the basis of longitudinal comparisons. The analyses suggest that the Kabompo River food webs follow the trophic ordination and nutrient cycling characteristic of the revised-Riverine Productivity Model. Food webs and community assemblages remain structurally similar between sites and provide some evidence of bottom-up productivity-driven trophic dynamics. To predict the possible landscape-scale processing of nutrient changes present for the aquatic ecosystems of the Kabompo River, a longitudinal comparison between a herbivore, Labeo cylindricus, and omnivore, Synodontis spp., fish species and their resources (primary producers and invertebrates) was done and showed archetypal fish food web trophic separation (2 ‰ to3 ‰) between species which remains consistent for the headwater sites. The nutrient values change at the convergence between the Kabompo Bridge and the Mwinilunga branches and show a decrease in the trophic separation of the sites below. This change becomes apparent from the last site, Watopa, where the trophic separation re-establishes (2 ‰ to 3 ‰) between the species. The trend suggests primarily autochthonous production in the headwater reaches, changing to allochthonous and autochthonous nutrient incorporation after the convergence of the two main branches. Permanent wetlands surrounding the convergence zones may be conducive to more primary producer activity and increased nutrient turnover. Permanent wetlands are a common feature of the Upper Zambezi Catchment tributaries, with the most notable lentic system the Barotse Flood Plains in the south, which shares reach-adjacent characteristics with the Kabompo River. Trends from the 2015 dry season identified for the Barotse Flood Plains support the findings of this thesis, where the δ13C values recorded reach depletion of -45 ‰. Management in the Upper Zambezi Basin and the Kabompo River comprises biannual assessments of water quality and quantity by the Zambezi River Authority, but not of the ecosystem process. This thesis may provide information to address the ecological (food webs and nutrient cycling) dynamics of the Basin rivers. As the first baseline information on the river's biology and ecology, it may present a comparative basis for future assessments under conservation management strategies. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2023
- Full Text:
- Date Issued: 2023-03-29
Evaluating the trophic ecology and feeding habits of three divergent lineages of Sandelia bainsii (Teleostei: Anabantidae), from the Eastern Cape Rivers using stable isotope analysis
- Authors: Nkomo, Thulisile
- Date: 2022-10-14
- Subjects: Anabantidae , Trophic ecology , Food chains (Ecology) , Food web , Freshwater fishes Food , Stable isotopes
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/364984 , vital:65667
- Description: Despite supporting a disproportionately large fraction of the global biodiversity, freshwater ecosystems are ranked as the most highly threatened habitats on the planet, ahead of both terrestrial and marine ecosystems. Many regions are still characterised by limited knowledge regarding the taxonomy and ecology of freshwater fish taxa. The need for ecological information is increasingly becoming important due to the discovery of new species and unique lineages, which require conservation management. The aim of this study was thus to evaluate the trophic ecology and feeding habits of the three recently described and divergent Sandelia bainsii lineages, namely Sandelia sp. ‘bainsii Kowie’ from the Great Fish River, Sandelia sp. ‘bainsii Keiskamma’ found in the Keiskamma River, and Sandelia sp. ‘bainsii Buffalo’ confined to the Buffalo River system in the Amathole-Winterberg freshwater ecoregion in the Eastern Cape Province, South Africa. Based on the allopatric distribution and the generalist feeding habits of these lineages, this thesis postulated that these three lineages were likely to show similar trophic ecology patterns, different dietary composition and as a result would have variable trophic positioning in the different river systems. Therefore, the primary objectives were to use stable isotope analysis to (1) evaluate the food web patterns of the river systems where the three S. bainsii lineages occurred, and (2) determine dietary source contributions for the three lineages using isotope mixing models. The results revealed general variability and significant differences in the δ13C and δ¹⁵N values for the different basal resources, macroinvertebrates and fish community across the different headwater streams. Within and across the different rivers, the S. bainsii lineages exhibited variable isotopic niche sizes, which appeared to coincide with the variation in the isotopic composition of the individual communities. Furthermore, these lineages did not exhibit any discernible patterns in their interspecific interactions in different habitats. This suggests that these lineages’ isotopic niche patterns were largely influenced by spatial differences in both trophic resources and probable interactions with contraspecifics. Assessment of trophic positions of S. bainsii lineages showed that the three lineages had higher trophic positions than other co-occurring species at most sites, except in the Buffalo River. This suggest that the different lineages were generally top predators in the different river systems. Although S. ‘bainsii Buffalo’ had a lower trophic position compared to other co-occurring species, its trophic position was generally characterised by high uncertainty, indicating that this lineage was likely influenced by the occurrence of diet sources that had highly variable stable isotope values. Findings from stable isotope mixing models revealed that the diet sources varied from the dominance of either single diet source in the Fairburn and Tyume 1 River to the importance of multiple prey sources from the Lushington and Kat River system. This suggests that despite being a top predator at most sites, the diet sources for the different lineages were highly variable. The patterns observed in this study did not appear to be attributed to species divergence possibly caused by allopatric speciation, but rather differences in food web characteristics of the river systems, as well as the lineages interspecific relationships and their generalized feeding strategies. Understanding the trophic dynamics of these lineages will assist in implementing effective conservation strategies and policies dealing with narrowly distributed species that are threatened by habitat fragmentation and invasion of piscivorous fish. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2022
- Full Text:
- Date Issued: 2022-10-14
- Authors: Nkomo, Thulisile
- Date: 2022-10-14
- Subjects: Anabantidae , Trophic ecology , Food chains (Ecology) , Food web , Freshwater fishes Food , Stable isotopes
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/364984 , vital:65667
- Description: Despite supporting a disproportionately large fraction of the global biodiversity, freshwater ecosystems are ranked as the most highly threatened habitats on the planet, ahead of both terrestrial and marine ecosystems. Many regions are still characterised by limited knowledge regarding the taxonomy and ecology of freshwater fish taxa. The need for ecological information is increasingly becoming important due to the discovery of new species and unique lineages, which require conservation management. The aim of this study was thus to evaluate the trophic ecology and feeding habits of the three recently described and divergent Sandelia bainsii lineages, namely Sandelia sp. ‘bainsii Kowie’ from the Great Fish River, Sandelia sp. ‘bainsii Keiskamma’ found in the Keiskamma River, and Sandelia sp. ‘bainsii Buffalo’ confined to the Buffalo River system in the Amathole-Winterberg freshwater ecoregion in the Eastern Cape Province, South Africa. Based on the allopatric distribution and the generalist feeding habits of these lineages, this thesis postulated that these three lineages were likely to show similar trophic ecology patterns, different dietary composition and as a result would have variable trophic positioning in the different river systems. Therefore, the primary objectives were to use stable isotope analysis to (1) evaluate the food web patterns of the river systems where the three S. bainsii lineages occurred, and (2) determine dietary source contributions for the three lineages using isotope mixing models. The results revealed general variability and significant differences in the δ13C and δ¹⁵N values for the different basal resources, macroinvertebrates and fish community across the different headwater streams. Within and across the different rivers, the S. bainsii lineages exhibited variable isotopic niche sizes, which appeared to coincide with the variation in the isotopic composition of the individual communities. Furthermore, these lineages did not exhibit any discernible patterns in their interspecific interactions in different habitats. This suggests that these lineages’ isotopic niche patterns were largely influenced by spatial differences in both trophic resources and probable interactions with contraspecifics. Assessment of trophic positions of S. bainsii lineages showed that the three lineages had higher trophic positions than other co-occurring species at most sites, except in the Buffalo River. This suggest that the different lineages were generally top predators in the different river systems. Although S. ‘bainsii Buffalo’ had a lower trophic position compared to other co-occurring species, its trophic position was generally characterised by high uncertainty, indicating that this lineage was likely influenced by the occurrence of diet sources that had highly variable stable isotope values. Findings from stable isotope mixing models revealed that the diet sources varied from the dominance of either single diet source in the Fairburn and Tyume 1 River to the importance of multiple prey sources from the Lushington and Kat River system. This suggests that despite being a top predator at most sites, the diet sources for the different lineages were highly variable. The patterns observed in this study did not appear to be attributed to species divergence possibly caused by allopatric speciation, but rather differences in food web characteristics of the river systems, as well as the lineages interspecific relationships and their generalized feeding strategies. Understanding the trophic dynamics of these lineages will assist in implementing effective conservation strategies and policies dealing with narrowly distributed species that are threatened by habitat fragmentation and invasion of piscivorous fish. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2022
- Full Text:
- Date Issued: 2022-10-14
Understanding biotic interactions in invaded pond communities in the Sundays River irrigation network, South Africa
- Authors: Mofu, Lubabalo
- Date: 2020
- Subjects: Mozambique tilapia -- South Africa -- Sundays River (Eastern Cape) , Western mosquitofish -- South Africa -- Sundays River (Eastern Cape) , Gobiidae -- South Africa -- Sundays River (Eastern Cape) , Clupeidae -- South Africa -- Sundays River (Eastern Cape) , Reservoirs -- South Africa -- Sundays River (Eastern Cape) , Zooplankton -- South Africa -- Sundays River (Eastern Cape) , Freshwater ecology -- South Africa -- Sundays River (Eastern Cape) , Biotic communities -- South Africa -- Sundays River (Eastern Cape) , Fishes -- Effect of temperature on -- South Africa -- Sundays River (Eastern Cape) , Stable isotopes , Relative Impact Potential
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/167089 , vital:41436
- Description: The Sundays River valley irrigation ponds provide a unique opportunity to investigate biotic interactions within a biological invasions context, as they contain both native and non-native fish species. This study focusses on two native species (Glossogobius callidus and Gilchristella aestuaria) and two non-native species (Oreochromis mossambicus and Gambusia affinis). The ecology of the ponds was driven by physico-chemical variables, mainly temperature, but the interactions between fishes were a complex interplay between temperature, pond community ecology and food web structure. Seasonal changes in temperature and subsequent fluctuations in water levels resulted in changes in zooplankton community. Chlorophyll-a, temperature, G. callidus and G. affinis were the drivers of the seasonal changes in macroinvertebrate composition. Stable isotope analysis identified substantial ontogenetic dietary shifts in all species, corresponding to changes in body size. Stable isotope analysis revealed that the niche space occupied by G. affinis was broad and overlapped with that of the other three focal species. Stable isotope metrics showed that G. affinis and O. mossambicus utilised a wide range of resources compared to G. callidus and G. aestuaria. Stomach content analysis showed that G. callidus, O. mossambicus and G. affinis fed predominantly on benthic resources, while G. aestuaria fed mainly plankton resources. Functional response experiments revealed that G. callidus and G. affinis both displayed Type II functional responses. In single fish trials, G. affinis had significantly higher functional responses than G. callidus. In heterospecific G. callidus-G. affinis combinations the functional response of G. callidus was reduced by the presence of G. affinis, whereas, this combination greatly enhanced G. affinis functional response magnitudes. The functional response of G. callidus, O. mossambicus and G. affinis under two temperature treatments along with fish abundance data was used to determine temporal differences in the ecological impacts of each fish species between seasons. The relative impact potential of O. mossambicus was consistently higher than that of G. callidus and G. affinis. This study demonstrates how seasonal temperature fluctuations affect the relative impact capacities of introduced species. Overall, this thesis showed that high temperature along with life-history traits contributes to the biotic interactions between native and non-native species in novel environments.
- Full Text:
- Date Issued: 2020
- Authors: Mofu, Lubabalo
- Date: 2020
- Subjects: Mozambique tilapia -- South Africa -- Sundays River (Eastern Cape) , Western mosquitofish -- South Africa -- Sundays River (Eastern Cape) , Gobiidae -- South Africa -- Sundays River (Eastern Cape) , Clupeidae -- South Africa -- Sundays River (Eastern Cape) , Reservoirs -- South Africa -- Sundays River (Eastern Cape) , Zooplankton -- South Africa -- Sundays River (Eastern Cape) , Freshwater ecology -- South Africa -- Sundays River (Eastern Cape) , Biotic communities -- South Africa -- Sundays River (Eastern Cape) , Fishes -- Effect of temperature on -- South Africa -- Sundays River (Eastern Cape) , Stable isotopes , Relative Impact Potential
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/167089 , vital:41436
- Description: The Sundays River valley irrigation ponds provide a unique opportunity to investigate biotic interactions within a biological invasions context, as they contain both native and non-native fish species. This study focusses on two native species (Glossogobius callidus and Gilchristella aestuaria) and two non-native species (Oreochromis mossambicus and Gambusia affinis). The ecology of the ponds was driven by physico-chemical variables, mainly temperature, but the interactions between fishes were a complex interplay between temperature, pond community ecology and food web structure. Seasonal changes in temperature and subsequent fluctuations in water levels resulted in changes in zooplankton community. Chlorophyll-a, temperature, G. callidus and G. affinis were the drivers of the seasonal changes in macroinvertebrate composition. Stable isotope analysis identified substantial ontogenetic dietary shifts in all species, corresponding to changes in body size. Stable isotope analysis revealed that the niche space occupied by G. affinis was broad and overlapped with that of the other three focal species. Stable isotope metrics showed that G. affinis and O. mossambicus utilised a wide range of resources compared to G. callidus and G. aestuaria. Stomach content analysis showed that G. callidus, O. mossambicus and G. affinis fed predominantly on benthic resources, while G. aestuaria fed mainly plankton resources. Functional response experiments revealed that G. callidus and G. affinis both displayed Type II functional responses. In single fish trials, G. affinis had significantly higher functional responses than G. callidus. In heterospecific G. callidus-G. affinis combinations the functional response of G. callidus was reduced by the presence of G. affinis, whereas, this combination greatly enhanced G. affinis functional response magnitudes. The functional response of G. callidus, O. mossambicus and G. affinis under two temperature treatments along with fish abundance data was used to determine temporal differences in the ecological impacts of each fish species between seasons. The relative impact potential of O. mossambicus was consistently higher than that of G. callidus and G. affinis. This study demonstrates how seasonal temperature fluctuations affect the relative impact capacities of introduced species. Overall, this thesis showed that high temperature along with life-history traits contributes to the biotic interactions between native and non-native species in novel environments.
- Full Text:
- Date Issued: 2020
Aspects of the nutritional physiology of the perlemoen Haliotis midae (L.) and red abalone H. rufescens (Swainson)
- Authors: Kemp, Justin Oliver Gordon
- Date: 2018
- Subjects: Haliotis midae , Haliotis midae fisheries , Red abalone , Haliotis midae -- Feeding and feeds , Red abalone -- Feeding and feeds , Haliotis midae -- Nutrition -- Requirements , Red abalone -- Nutrition -- Requirements , Haliotis midae -- Metabolism , Red abalone -- Metabolism , Haliotis midae -- Physiology , Red abalone -- Physiology , Stable isotopes , Algae as feed
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/62314 , vital:28154
- Description: The source of abalone for human consumption has shown a dramatic shift away from wild-capture fisheries in the last 30 years, with over 90% of global production now coming from aquaculture. Farmers initially relied on the natural food of abalone (macroalgae) as a culture feed, though in regions where macroalgae availability was limiting, the need to develop formulated feeds was evident. Extensive research effort has led to the development of a number of formulated feed products currently employed in the industry. These feeds, however, differ markedly from the mixed macroalgal diets that abalone have evolved to utilise, particularly in terms of protein content and carbohydrate structure. The degree to which the nutritional physiology of abalone responds to these novel formulated diets, with and without macroalgal supplementation, was investigated in the current study. A multifaceted approach, combining growth trials, stable isotope nutrient tracers and metabolic experiments, was employed to gain insight into the post-absorption dynamics and utilisation of dietary nutrients under varying dietary regimes of fresh macroalgae and formulated feed. Growth trials conducted with both Haliotis rufescens and H. midae showed significantly higher growth and protein utilisation efficiency for abalone fed macroalgal diets compared to formulated feeds. Furthermore, when formulated feeds were supplemented with macroalgae to form combination diets, growth and the utilization of protein was improved compared to the formulated-feed-only diet. The poor utilisation of protein by H. midae fed the formulated feed could be traced, using a method combining stable isotope bio-markers with a Bayesian mixing model (SIAR), to the low incorporation of the fishmeal component of protein in the diet. The marked postprandial drop in the O:N ratio on abalone fed formulated feeds indicate that the protein was being diverted into catabolic metabolic pathways. The metabolic cost of digestion, termed specific dynamic action (SDA), was negated as a factor in the improved growth of abalone fed macroalgal diets, with the SDA coefficient 2.1 times that observed for formulated feed. Furthermore, the postprandial haemolymph glucose concentration (HGC) in H. midae was elevated when fed formulated feed compared to macroalgae. The high levels of circulating glucose are likely a result of the structure the carbohydrate source in formulated feeds and stimulate the deposition of glycogen through the allosteric control of glycogen synthase. Formulated feeds produced higher cooked meat yields in canning simulation trials, suggesting that muscle glycogen content may indirectly play a role in increasing canning yields through the displacement of collagen. The results of these empirical studies are synthesised under key themes, discussed within the context of their potential commercial relevance and future research directions are highlighted.
- Full Text:
- Date Issued: 2018
- Authors: Kemp, Justin Oliver Gordon
- Date: 2018
- Subjects: Haliotis midae , Haliotis midae fisheries , Red abalone , Haliotis midae -- Feeding and feeds , Red abalone -- Feeding and feeds , Haliotis midae -- Nutrition -- Requirements , Red abalone -- Nutrition -- Requirements , Haliotis midae -- Metabolism , Red abalone -- Metabolism , Haliotis midae -- Physiology , Red abalone -- Physiology , Stable isotopes , Algae as feed
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/62314 , vital:28154
- Description: The source of abalone for human consumption has shown a dramatic shift away from wild-capture fisheries in the last 30 years, with over 90% of global production now coming from aquaculture. Farmers initially relied on the natural food of abalone (macroalgae) as a culture feed, though in regions where macroalgae availability was limiting, the need to develop formulated feeds was evident. Extensive research effort has led to the development of a number of formulated feed products currently employed in the industry. These feeds, however, differ markedly from the mixed macroalgal diets that abalone have evolved to utilise, particularly in terms of protein content and carbohydrate structure. The degree to which the nutritional physiology of abalone responds to these novel formulated diets, with and without macroalgal supplementation, was investigated in the current study. A multifaceted approach, combining growth trials, stable isotope nutrient tracers and metabolic experiments, was employed to gain insight into the post-absorption dynamics and utilisation of dietary nutrients under varying dietary regimes of fresh macroalgae and formulated feed. Growth trials conducted with both Haliotis rufescens and H. midae showed significantly higher growth and protein utilisation efficiency for abalone fed macroalgal diets compared to formulated feeds. Furthermore, when formulated feeds were supplemented with macroalgae to form combination diets, growth and the utilization of protein was improved compared to the formulated-feed-only diet. The poor utilisation of protein by H. midae fed the formulated feed could be traced, using a method combining stable isotope bio-markers with a Bayesian mixing model (SIAR), to the low incorporation of the fishmeal component of protein in the diet. The marked postprandial drop in the O:N ratio on abalone fed formulated feeds indicate that the protein was being diverted into catabolic metabolic pathways. The metabolic cost of digestion, termed specific dynamic action (SDA), was negated as a factor in the improved growth of abalone fed macroalgal diets, with the SDA coefficient 2.1 times that observed for formulated feed. Furthermore, the postprandial haemolymph glucose concentration (HGC) in H. midae was elevated when fed formulated feed compared to macroalgae. The high levels of circulating glucose are likely a result of the structure the carbohydrate source in formulated feeds and stimulate the deposition of glycogen through the allosteric control of glycogen synthase. Formulated feeds produced higher cooked meat yields in canning simulation trials, suggesting that muscle glycogen content may indirectly play a role in increasing canning yields through the displacement of collagen. The results of these empirical studies are synthesised under key themes, discussed within the context of their potential commercial relevance and future research directions are highlighted.
- Full Text:
- Date Issued: 2018
Two-tissue stable isotope analysis to elucidate isotopic incorporation and trophic niche patterns for chubbyhead barb Enteromius anoplus
- Authors: Kambikambi, Manda Juliet
- Date: 2018
- Subjects: Food chains (Ecology) , Barbus -- South Africa -- Great Fish River Estuary , Stable isotopes , Freshwater fishes -- Feeding and feeds , Freshwater fishes -- Food , Fins (Anatomy) , Akaike Information Criterion , Freshwater fishes -- Conservation , Chubbyhead barb Enteromius anoplus
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61906 , vital:28082
- Description: Knowledge of trophic ecology underpins conservation and management of threatened species. Stable isotope analysis has been widely used as a more objective approach for elucidating the trophic positions of freshwater fishes. Until recently, stable isotope analysis for trophic ecology studies in freshwater fishes largely utilised white muscle tissue. This sampling approach, however, involves either euthanasia or muscle biopsy procedures that may be inappropriate for small-sized and endangered fishes. These concerns raised the need to explore and validate the utility of non-lethal alternatives such as fin clips, mucus and scales. The present study investigated the use of caudal fin tissue as a potential non-lethal alternative to muscle tissue for trophic studies on the chubbyhead barb Enteromius anoplus. The chubbyhead barb was selected as a model taxon for the present study because it is closely related or comparable in body size to a number of highly threatened small-bodied minnows in southern Africa. The chubbyhead barb was also considered an ideal species for this study because it is widespread, abundant and classified as Least Concern on the IUCN list of threatened species. The study used a two-pronged approach based on laboratory and field experiments. A laboratory experiment was conducted to quantify isotopic turnover rates and diet-tissue discrimination factors (DTDFs/A) for both muscle and fin tissues. This involved feeding chubbyhead barb two diets with distinct carbon (δ13C) and nitrogen (δ15N) values, and monitoring the temporal isotopic incorporation patterns into the two tissues. These patterns were assessed by applying least squares non-linear one- and two-compartment isotopic kinetics models. Model comparisons, based on Akaike information criterion (AIC), revealed that one- compartment models described isotopic incorporation patterns better than two-compartment models for both muscle and fin tissues. For δ13C, relatively short and comparable turnover rates were observed for muscle and fin tissues, which suggests that fin tissue could potentially provide similar inference as muscle tissue when assessing short term dietary patterns for chubbyhead barb. In contrast to δ13C, turnover rates for δ15N between muscle and fin tissue were different for both diets. Specifically, stable isotope incorporation turnover rate was faster in muscle tissue for animals that were fed on isotopically enriched diets compared to fin tissue. Conversely, stable isotope incorporation into fin tissue was faster in animals fed on isotopically depleted diets compared to muscle tissue. This suggests that knowledge of animal diet is critical when inferring fin tissue δ15N turnover rates, particularly when extrapolating both short and long term dietary patterns. Diet-tissue discrimination factors were influenced by diet type, with the fish fed on isotopically enriched diet having lower DTDFs than animals fed on isotopically depleted diets. This variation may be explained by the protein quality hypothesis, which suggests that the DTDFs of consumers will decrease as protein quality increases. When A13C and A15N values were averaged across diets in muscle and fin tissue, the values were 0.74‰ and 0.64‰, respectively, for A13C, and 5.53‰ and 5.83 ‰, respectively, for A15N. This appeared to be consistent with studies on other taxa for A13C (0-1 ‰), but for A15N (3-5 ‰) the results of this study were higher than those reported for other taxa. These results suggest that investigating appropriate DTDFs for both muscle and fin tissues is important in trophic ecology studies of these minnows. A field-based study was conducted to investigate temporal dynamics in food web patterns for chubbyhead barb in the wild within the headwaters of the Koonap River, a tributary of the Great Fish River, in the Eastern Cape, South Africa. This was achieved by collecting and comparing stable isotope data for chubbyhead barb and its potential food sources on a seasonal scale. There was a discernible difference in both the composition of carbon and nitrogen isotope values for basal food sources and macroinvertebrate communities, which suggests that this headwater stream was subject to temporal changes in food web dynamics. For chubbyhead barb, comparison of its isotopic niche sizes on a temporal scale based on both muscle and fin tissue showed differences across seasons. Furthermore, isotopic niche sizes inferred from fin tissue were larger than those inferred from muscle tissue during winter and spring, whereas during summer and autumn the isotopic niche sizes inferred from muscle and fin tissue were generally comparable. This suggests the likely influence of different metabolic and physiological processes that these two tissues undergo on a temporal scale. Therefore, difference in tissue type, and their associated metabolic pathways should be considered when using fin tissue as a substitute for muscle tissue on broad temporal scales. The results from this study indicated that caudal fin tissue has the potential to be a substitute for muscle in trophic studies of chubbyhead barb Enteromius anoplus, as well as other related small bodied endangered minnow species from South Africa.
- Full Text:
- Date Issued: 2018
- Authors: Kambikambi, Manda Juliet
- Date: 2018
- Subjects: Food chains (Ecology) , Barbus -- South Africa -- Great Fish River Estuary , Stable isotopes , Freshwater fishes -- Feeding and feeds , Freshwater fishes -- Food , Fins (Anatomy) , Akaike Information Criterion , Freshwater fishes -- Conservation , Chubbyhead barb Enteromius anoplus
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61906 , vital:28082
- Description: Knowledge of trophic ecology underpins conservation and management of threatened species. Stable isotope analysis has been widely used as a more objective approach for elucidating the trophic positions of freshwater fishes. Until recently, stable isotope analysis for trophic ecology studies in freshwater fishes largely utilised white muscle tissue. This sampling approach, however, involves either euthanasia or muscle biopsy procedures that may be inappropriate for small-sized and endangered fishes. These concerns raised the need to explore and validate the utility of non-lethal alternatives such as fin clips, mucus and scales. The present study investigated the use of caudal fin tissue as a potential non-lethal alternative to muscle tissue for trophic studies on the chubbyhead barb Enteromius anoplus. The chubbyhead barb was selected as a model taxon for the present study because it is closely related or comparable in body size to a number of highly threatened small-bodied minnows in southern Africa. The chubbyhead barb was also considered an ideal species for this study because it is widespread, abundant and classified as Least Concern on the IUCN list of threatened species. The study used a two-pronged approach based on laboratory and field experiments. A laboratory experiment was conducted to quantify isotopic turnover rates and diet-tissue discrimination factors (DTDFs/A) for both muscle and fin tissues. This involved feeding chubbyhead barb two diets with distinct carbon (δ13C) and nitrogen (δ15N) values, and monitoring the temporal isotopic incorporation patterns into the two tissues. These patterns were assessed by applying least squares non-linear one- and two-compartment isotopic kinetics models. Model comparisons, based on Akaike information criterion (AIC), revealed that one- compartment models described isotopic incorporation patterns better than two-compartment models for both muscle and fin tissues. For δ13C, relatively short and comparable turnover rates were observed for muscle and fin tissues, which suggests that fin tissue could potentially provide similar inference as muscle tissue when assessing short term dietary patterns for chubbyhead barb. In contrast to δ13C, turnover rates for δ15N between muscle and fin tissue were different for both diets. Specifically, stable isotope incorporation turnover rate was faster in muscle tissue for animals that were fed on isotopically enriched diets compared to fin tissue. Conversely, stable isotope incorporation into fin tissue was faster in animals fed on isotopically depleted diets compared to muscle tissue. This suggests that knowledge of animal diet is critical when inferring fin tissue δ15N turnover rates, particularly when extrapolating both short and long term dietary patterns. Diet-tissue discrimination factors were influenced by diet type, with the fish fed on isotopically enriched diet having lower DTDFs than animals fed on isotopically depleted diets. This variation may be explained by the protein quality hypothesis, which suggests that the DTDFs of consumers will decrease as protein quality increases. When A13C and A15N values were averaged across diets in muscle and fin tissue, the values were 0.74‰ and 0.64‰, respectively, for A13C, and 5.53‰ and 5.83 ‰, respectively, for A15N. This appeared to be consistent with studies on other taxa for A13C (0-1 ‰), but for A15N (3-5 ‰) the results of this study were higher than those reported for other taxa. These results suggest that investigating appropriate DTDFs for both muscle and fin tissues is important in trophic ecology studies of these minnows. A field-based study was conducted to investigate temporal dynamics in food web patterns for chubbyhead barb in the wild within the headwaters of the Koonap River, a tributary of the Great Fish River, in the Eastern Cape, South Africa. This was achieved by collecting and comparing stable isotope data for chubbyhead barb and its potential food sources on a seasonal scale. There was a discernible difference in both the composition of carbon and nitrogen isotope values for basal food sources and macroinvertebrate communities, which suggests that this headwater stream was subject to temporal changes in food web dynamics. For chubbyhead barb, comparison of its isotopic niche sizes on a temporal scale based on both muscle and fin tissue showed differences across seasons. Furthermore, isotopic niche sizes inferred from fin tissue were larger than those inferred from muscle tissue during winter and spring, whereas during summer and autumn the isotopic niche sizes inferred from muscle and fin tissue were generally comparable. This suggests the likely influence of different metabolic and physiological processes that these two tissues undergo on a temporal scale. Therefore, difference in tissue type, and their associated metabolic pathways should be considered when using fin tissue as a substitute for muscle tissue on broad temporal scales. The results from this study indicated that caudal fin tissue has the potential to be a substitute for muscle in trophic studies of chubbyhead barb Enteromius anoplus, as well as other related small bodied endangered minnow species from South Africa.
- Full Text:
- Date Issued: 2018
Comparative fish ecology in three periodically connected rivers in the upper Zambezi and Okavango ecoregions
- Authors: Taylor, Geraldine Claire
- Date: 2017
- Subjects: Fishes Ecology Zambia Zambezi District , Floodplain ecology Zambia Zambezi District , Stable isotopes , Fishes Food Zambia Zambezi District , Fishes Mortality Zambia Zambezi District , Fish populations Zambia Zambezi District , Fishes Growth
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10962/65055 , vital:28660 , DOI https://doi.org/10.21504/10962/65055
- Description: The Upper Zambezi, Kavango and Kwando rivers are three periodically interlinked floodplain rivers which share the same Upper Zambezian floodplain ichthyofauna. The aim of this thesis was to compare the biology and ecology of the fish communities in these three rivers. The objective was to test the hypothesis that fish community composition and assemblage structure, fish diets, food web structure and trophic dynamics, fish growth rates and total mortality are influenced by the differing flood magnitudes of the three rivers, in support of the flood pulse concept. To understand the abiotic characteristics of each river, water temperature, flood regime, total dissolved inorganic nitrogen concentrations and water quality parameters were measured and compared between rivers. Water temperatures varied seasonally, and seven day moving averages peaked above 30 °C in January, and fell to between 16 and 19 °C in June. The Zambezi River had the largest flood (6.14 m), followed by the Kavango River (3.80 m), while the Kwando River had the smallest flood (0.65 m). Total dissolved inorganic nitrogen concentrations were low in the Kavango and Zambezi Rivers (0.2 - 0.6 mg/l), and slightly higher in the Kwando River (<1 mg/l). Conductivity, total dissolved solids and total dissolved inorganic nitrogen concentrations decreased with the flood (dilution effect). Using biomass catch per unit effort data from experimental gillnets, fish community composition and assemblage structure was described, and differed between rivers in all hydrological seasons. In the Zambezi and Kavango rivers, fish assemblages varied with hydrological season as a result of the homogenising influence of the flood pulse, while in the Kwando River fish assemblages did not differ seasonally as flood pulses were small and often irregular. Differences in community composition were attributed to the abundance of Hydrocynus vittatus, a large bodied open water predator, in the Zambezi and Kavango rivers, and its relative absence in the Kwando River. Based on the results of the community composition, six focus species were chosen that were abundant and representative of the various feeding modes and life history strategies of the fish community. These were the striped robber Brycinus lateralis, sharptooth catfish Clarias gariepinus, blunttooth catfish Clarias ngamensis, African pike Hepsetus cuvieri, silver catfish Schilbe intermedius and purpleface largemouth Serranochromis macrocephalus. Stomach contents analysis was then used to compare the feeding ecology of the six example species between rivers. Clarias gariepinus, C. ngamensis and S. intermedius were piscivorous in the Zambezi and Kavango rivers, and preyed upon more invertebrates in the Kwando River, while Hepsetus cuvieri and S. macrocephalus were piscivorous in all three rivers. Differences in diets were attributed to seasonal prey abundance, with prey fishes abundant during falling and low water when the Zambezi and Kavango rivers were sampled, while invertebrates were abundant during rising and high water when the Kwando River was sampled. Prey mastication by B. lateralis made prey identification difficult. For other predators, the usefulness of stomach contents analysis for dietary descriptions was restricted by the high proportion of empty stomachs. As a result, whole ecosystem stable isotope analysis was used to gain a holistic understanding of the food web structure and fish feeding ecology of the three rivers. The Zambezi and Kavango river food webs were supported by C enriched resources such as C4 and C3 riparian vegetation from the floodplain, while the Kwando River food web was based on C depleted resources such as filamentous algae and aquatic macrophytes. The Zambezi River food web had a restricted nitrogen range, with reduced food chain length and the predators in this river did not occupy such elevated trophic positions compared to in the Kavango and Kwando river food webs. This was attributed to the overfishing of the primary and tertiary consumers in the Zambezi River, a phenomenon known to reduce food chain length. Focussing on predator communities, in the Zambezi and Kavango rivers, H. vittatus isotopic niche width was large and overlapped significantly with most other predators, while in the Kwando River predator niches were more distinct. This supported previously proposed hypotheses by describing H. vittatus as a dominant predator which excludes all other fishes by predation or competition. Despite the dominance of H. vittatus, C. gariepinus occupied the position of top predator in all three rivers, and information on the habitat use, feeding habits and trophic niches of the serranochromine cichlids added understanding of their ecology. Lastly, age was determined using sectioned sagittal otoliths for C. gariepinus, C. ngamensis, S. intermedius and S. macrocephalus and using whole asteriscus otoliths for B. lateralis and H. cuvieri, and growth was modelled using the von Bertalanffy growth equation. Growth performance was high in the Zambezi and Kavango rivers, and lower in the Kwando River, most likely in response to the varying flood magnitudes. Total mortality rates, estimated using Hoenig’s maximum-age based equation, were high in the Zambezi River as a result of the high fishing pressure on this river. Overall floodplain fish ecology in the Zambezi, Kavango and Kwando rivers was influenced by the flood pulse, as was predicted by the flood pulse concept. Periodic and equilibrium life history strategists were found to adapt either to the pulsing environments of the Zambezi and Kavango rivers, or to the more stable environment of the Kwando River, and large bodied, long lived periodic strategists such as C. gariepinus tended to be highly plastic and able to thrive in most conditions. Data also suggested that Zambezi River food web structure and fish mortality rates have been impacted by overfishing, for which more information is needed to conserve and manage this system. , Thesis (PhD) -- Faculty of Science, Ichthyology and Fisheries Science, 2018
- Full Text:
- Date Issued: 2017
- Authors: Taylor, Geraldine Claire
- Date: 2017
- Subjects: Fishes Ecology Zambia Zambezi District , Floodplain ecology Zambia Zambezi District , Stable isotopes , Fishes Food Zambia Zambezi District , Fishes Mortality Zambia Zambezi District , Fish populations Zambia Zambezi District , Fishes Growth
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10962/65055 , vital:28660 , DOI https://doi.org/10.21504/10962/65055
- Description: The Upper Zambezi, Kavango and Kwando rivers are three periodically interlinked floodplain rivers which share the same Upper Zambezian floodplain ichthyofauna. The aim of this thesis was to compare the biology and ecology of the fish communities in these three rivers. The objective was to test the hypothesis that fish community composition and assemblage structure, fish diets, food web structure and trophic dynamics, fish growth rates and total mortality are influenced by the differing flood magnitudes of the three rivers, in support of the flood pulse concept. To understand the abiotic characteristics of each river, water temperature, flood regime, total dissolved inorganic nitrogen concentrations and water quality parameters were measured and compared between rivers. Water temperatures varied seasonally, and seven day moving averages peaked above 30 °C in January, and fell to between 16 and 19 °C in June. The Zambezi River had the largest flood (6.14 m), followed by the Kavango River (3.80 m), while the Kwando River had the smallest flood (0.65 m). Total dissolved inorganic nitrogen concentrations were low in the Kavango and Zambezi Rivers (0.2 - 0.6 mg/l), and slightly higher in the Kwando River (<1 mg/l). Conductivity, total dissolved solids and total dissolved inorganic nitrogen concentrations decreased with the flood (dilution effect). Using biomass catch per unit effort data from experimental gillnets, fish community composition and assemblage structure was described, and differed between rivers in all hydrological seasons. In the Zambezi and Kavango rivers, fish assemblages varied with hydrological season as a result of the homogenising influence of the flood pulse, while in the Kwando River fish assemblages did not differ seasonally as flood pulses were small and often irregular. Differences in community composition were attributed to the abundance of Hydrocynus vittatus, a large bodied open water predator, in the Zambezi and Kavango rivers, and its relative absence in the Kwando River. Based on the results of the community composition, six focus species were chosen that were abundant and representative of the various feeding modes and life history strategies of the fish community. These were the striped robber Brycinus lateralis, sharptooth catfish Clarias gariepinus, blunttooth catfish Clarias ngamensis, African pike Hepsetus cuvieri, silver catfish Schilbe intermedius and purpleface largemouth Serranochromis macrocephalus. Stomach contents analysis was then used to compare the feeding ecology of the six example species between rivers. Clarias gariepinus, C. ngamensis and S. intermedius were piscivorous in the Zambezi and Kavango rivers, and preyed upon more invertebrates in the Kwando River, while Hepsetus cuvieri and S. macrocephalus were piscivorous in all three rivers. Differences in diets were attributed to seasonal prey abundance, with prey fishes abundant during falling and low water when the Zambezi and Kavango rivers were sampled, while invertebrates were abundant during rising and high water when the Kwando River was sampled. Prey mastication by B. lateralis made prey identification difficult. For other predators, the usefulness of stomach contents analysis for dietary descriptions was restricted by the high proportion of empty stomachs. As a result, whole ecosystem stable isotope analysis was used to gain a holistic understanding of the food web structure and fish feeding ecology of the three rivers. The Zambezi and Kavango river food webs were supported by C enriched resources such as C4 and C3 riparian vegetation from the floodplain, while the Kwando River food web was based on C depleted resources such as filamentous algae and aquatic macrophytes. The Zambezi River food web had a restricted nitrogen range, with reduced food chain length and the predators in this river did not occupy such elevated trophic positions compared to in the Kavango and Kwando river food webs. This was attributed to the overfishing of the primary and tertiary consumers in the Zambezi River, a phenomenon known to reduce food chain length. Focussing on predator communities, in the Zambezi and Kavango rivers, H. vittatus isotopic niche width was large and overlapped significantly with most other predators, while in the Kwando River predator niches were more distinct. This supported previously proposed hypotheses by describing H. vittatus as a dominant predator which excludes all other fishes by predation or competition. Despite the dominance of H. vittatus, C. gariepinus occupied the position of top predator in all three rivers, and information on the habitat use, feeding habits and trophic niches of the serranochromine cichlids added understanding of their ecology. Lastly, age was determined using sectioned sagittal otoliths for C. gariepinus, C. ngamensis, S. intermedius and S. macrocephalus and using whole asteriscus otoliths for B. lateralis and H. cuvieri, and growth was modelled using the von Bertalanffy growth equation. Growth performance was high in the Zambezi and Kavango rivers, and lower in the Kwando River, most likely in response to the varying flood magnitudes. Total mortality rates, estimated using Hoenig’s maximum-age based equation, were high in the Zambezi River as a result of the high fishing pressure on this river. Overall floodplain fish ecology in the Zambezi, Kavango and Kwando rivers was influenced by the flood pulse, as was predicted by the flood pulse concept. Periodic and equilibrium life history strategists were found to adapt either to the pulsing environments of the Zambezi and Kavango rivers, or to the more stable environment of the Kwando River, and large bodied, long lived periodic strategists such as C. gariepinus tended to be highly plastic and able to thrive in most conditions. Data also suggested that Zambezi River food web structure and fish mortality rates have been impacted by overfishing, for which more information is needed to conserve and manage this system. , Thesis (PhD) -- Faculty of Science, Ichthyology and Fisheries Science, 2018
- Full Text:
- Date Issued: 2017
Dietary aspects of establishing a mainland-based colony of the endangered African Penguin (Spheniscus demersus) in St Francis Bay, South Africa
- Authors: Voogt, Nina Margaret
- Date: 2014
- Subjects: African penguin -- South Africa -- Cape Saint Francis , African penguin -- Food -- South Africa -- Algoa Bay , African penguin -- Habitat suitability index models -- South Africa -- Cape Saint Francis , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5875 , http://hdl.handle.net/10962/d1013115
- Description: Cape St Francis, Eastern Cape, has been identified as one of four potential sites for establishing a mainland-based African penguin (Spheniscus demersus) colony. This thesis comprises three main components: a verification of a preparation method for stable isotope samples from penguin feathers; a dietary analysis of the penguins on Bird Island, Algoa Bay, though stable isotope analysis of whole blood and feathers (2012 and 2013); and an estimation of available fish surplus that could potentially support a colony of penguins at Cape St Francis. Each component contributes towards the next, all building towards answering the main research question: Will there be enough food around St Francis Bay to support a colony of penguins and sustain the already established fisheries industry within the bay? Stable isotope analysis of whole blood and feathers from breeding adults and whole blood from juveniles provided insight into the variability of African penguins’ diets at different stages in their life history. Stable isotope mixing models indicated that the predicted proportions that each prey species could potentially contribute to diet conflicted with published stomach sample data. This might arise from inaccurate trophic enrichment factors used in the model, or from systematic biases in the published stomach sampling techniques, or both. Dietary sexual dimorphism was not demonstrated by the isotope signatures of breeding penguins. Based on official catch data, the fisheries activity on the south coast, and especially around the potential colony site at St Francis, is much lower than around the west coast’s penguin colonies. The model provided a first-order estimate for fish supply around the potential colony site at St Francis both at a large coastal scale and a local small scale. At both scales the estimate indicated an ample availability of fish at current fishing levels. The model in Chapter 4 can also be applied to refining the assessments of other potential colony sites on the south coast. In conclusion, the south coast is a promising area for a new colony of penguins in terms of food availability. There is relatively low fishing activity in the area and, as suggested by the large-scale model in Chapter 4, an ample fish resource. The final chapter briefly discusses factors that need to be considered before attempting to establish a mainland-based colony of African penguins.
- Full Text:
- Date Issued: 2014
- Authors: Voogt, Nina Margaret
- Date: 2014
- Subjects: African penguin -- South Africa -- Cape Saint Francis , African penguin -- Food -- South Africa -- Algoa Bay , African penguin -- Habitat suitability index models -- South Africa -- Cape Saint Francis , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5875 , http://hdl.handle.net/10962/d1013115
- Description: Cape St Francis, Eastern Cape, has been identified as one of four potential sites for establishing a mainland-based African penguin (Spheniscus demersus) colony. This thesis comprises three main components: a verification of a preparation method for stable isotope samples from penguin feathers; a dietary analysis of the penguins on Bird Island, Algoa Bay, though stable isotope analysis of whole blood and feathers (2012 and 2013); and an estimation of available fish surplus that could potentially support a colony of penguins at Cape St Francis. Each component contributes towards the next, all building towards answering the main research question: Will there be enough food around St Francis Bay to support a colony of penguins and sustain the already established fisheries industry within the bay? Stable isotope analysis of whole blood and feathers from breeding adults and whole blood from juveniles provided insight into the variability of African penguins’ diets at different stages in their life history. Stable isotope mixing models indicated that the predicted proportions that each prey species could potentially contribute to diet conflicted with published stomach sample data. This might arise from inaccurate trophic enrichment factors used in the model, or from systematic biases in the published stomach sampling techniques, or both. Dietary sexual dimorphism was not demonstrated by the isotope signatures of breeding penguins. Based on official catch data, the fisheries activity on the south coast, and especially around the potential colony site at St Francis, is much lower than around the west coast’s penguin colonies. The model provided a first-order estimate for fish supply around the potential colony site at St Francis both at a large coastal scale and a local small scale. At both scales the estimate indicated an ample availability of fish at current fishing levels. The model in Chapter 4 can also be applied to refining the assessments of other potential colony sites on the south coast. In conclusion, the south coast is a promising area for a new colony of penguins in terms of food availability. There is relatively low fishing activity in the area and, as suggested by the large-scale model in Chapter 4, an ample fish resource. The final chapter briefly discusses factors that need to be considered before attempting to establish a mainland-based colony of African penguins.
- Full Text:
- Date Issued: 2014
Trophic relationships of hake (Merluccius capensis Castelnau, 1851 and M. paradoxus Franca 1960) from the Northern Benguela current ecosystem (Namibia) : inferences from stable isotopes and fatty acids
- Authors: Iitembu, Johannes Angala
- Date: 2014
- Subjects: Hake -- Benguela Current , Merlucciidae -- Benguela Current , Multitrophic interactions (Ecology) , Food chains (Ecology) , Biotic communities -- Benguela Current , Merlucciidae -- Food , Fishery management -- Namibia , Stable isotopes , Fatty acids
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5944 , http://hdl.handle.net/10962/d1020296
- Description: Two species of hake (Merluccius capensis and Merluccius paradoxus) account for most of Namibia’s fisheries catch, and they are important secondary consumers in the Benguela Current ecosystem. Inferences on their trophic relationships have been based mainly on stomach content analyses. However, such data are limited temporally because they represent only snapshots of recent feeding, and are quantitatively biased because of variation in the digestion rates of different prey. The principal aim of the thesis was to understand the trophic relationships of two hake species relative to each other, their known prey and top predators (demersal sharks) in the northern Benguela Current ecosystem (Namibia), using time-integrating trophic biomarkers. By using stable isotope (carbon and nitrogen) and fatty acid signatures of their muscle tissues, my overall objectives were to produce new knowledge about 1) hake ontogenic trophic relationships, 2) the contributions of different prey to hake diets, 3) hake dietary differences, and 4) some aspects of hake’s trophic relationships with demersal sharks. Tissues of hake (n=358), their potential prey (n=455), and demersal sharks (n=42) were collected between 2008 and 2012 during demersal bottom trawl surveys off Namibia, for stable isotope and fatty acid analyses. And more...
- Full Text:
- Date Issued: 2014
- Authors: Iitembu, Johannes Angala
- Date: 2014
- Subjects: Hake -- Benguela Current , Merlucciidae -- Benguela Current , Multitrophic interactions (Ecology) , Food chains (Ecology) , Biotic communities -- Benguela Current , Merlucciidae -- Food , Fishery management -- Namibia , Stable isotopes , Fatty acids
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5944 , http://hdl.handle.net/10962/d1020296
- Description: Two species of hake (Merluccius capensis and Merluccius paradoxus) account for most of Namibia’s fisheries catch, and they are important secondary consumers in the Benguela Current ecosystem. Inferences on their trophic relationships have been based mainly on stomach content analyses. However, such data are limited temporally because they represent only snapshots of recent feeding, and are quantitatively biased because of variation in the digestion rates of different prey. The principal aim of the thesis was to understand the trophic relationships of two hake species relative to each other, their known prey and top predators (demersal sharks) in the northern Benguela Current ecosystem (Namibia), using time-integrating trophic biomarkers. By using stable isotope (carbon and nitrogen) and fatty acid signatures of their muscle tissues, my overall objectives were to produce new knowledge about 1) hake ontogenic trophic relationships, 2) the contributions of different prey to hake diets, 3) hake dietary differences, and 4) some aspects of hake’s trophic relationships with demersal sharks. Tissues of hake (n=358), their potential prey (n=455), and demersal sharks (n=42) were collected between 2008 and 2012 during demersal bottom trawl surveys off Namibia, for stable isotope and fatty acid analyses. And more...
- Full Text:
- Date Issued: 2014
Contributions of inshore and offshore sources of primary production to the foodweb, and the trophic connectivity between various habitats along a depth-gradient, in Sodwana Bay, Kwazulu-Natal, South Africa
- Authors: Parkinson, Matthew Cameron
- Date: 2013
- Subjects: Marine ecology -- South Africa -- Sodwana Bay , Food chains (Ecology) -- South Africa -- Sodwana Bay , Coastal ecology -- South Africa -- Sodwana Bay , Stable isotopes , Dinoflagellates , Marine algae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5179 , http://hdl.handle.net/10962/d1001630 , Marine ecology -- South Africa -- Sodwana Bay , Food chains (Ecology) -- South Africa -- Sodwana Bay , Coastal ecology -- South Africa -- Sodwana Bay , Stable isotopes , Dinoflagellates , Marine algae
- Description: Sodwana Bay, situated within the iSimangaliso Wetland Park, is ecologically important as it contains high-latitude corals and the most southerly known population of coelacanths. This thesis utilised stable isotope and lipid analyses to investigate the trophic ecology of the area, in particular, understanding the relative contribution of inshore and offshore primary production to consumers inhabiting intertidal and shallow subtidal, coral reef, deep reef, canyon head and pelagic habitats. Seaweeds, excluding certain species of red seaweeds with highly depleted carbon signatures, and phytoplankton, such as diatoms, were found to be the principal sources of primary production for all consumers. Offshore production was typified by dinoflagellates. Particulate organic matter (POM) was spatio-temporally variable. Three distinct productivity periods related to nutrient cycling were noted with enriched carbon signatures and higher organic matter loads associated with warmer water. Inshore primary production was an important source of carbon to consumers in all habitats with the exception of zooplankton that were more reliant on pelagic primary production. Benthic invertebrates reflected a gradient in the utilisation of inshore production, due to the reduced availability of this source further offshore. Consumers at the furthest sites offshore were found to include a substantial quantity of inshore-derived production in their diets. Fishes, which are more mobile, were found to incorporate a similar proportion of inshore production into their diets regardless of where they were collected from.
- Full Text:
- Date Issued: 2013
- Authors: Parkinson, Matthew Cameron
- Date: 2013
- Subjects: Marine ecology -- South Africa -- Sodwana Bay , Food chains (Ecology) -- South Africa -- Sodwana Bay , Coastal ecology -- South Africa -- Sodwana Bay , Stable isotopes , Dinoflagellates , Marine algae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5179 , http://hdl.handle.net/10962/d1001630 , Marine ecology -- South Africa -- Sodwana Bay , Food chains (Ecology) -- South Africa -- Sodwana Bay , Coastal ecology -- South Africa -- Sodwana Bay , Stable isotopes , Dinoflagellates , Marine algae
- Description: Sodwana Bay, situated within the iSimangaliso Wetland Park, is ecologically important as it contains high-latitude corals and the most southerly known population of coelacanths. This thesis utilised stable isotope and lipid analyses to investigate the trophic ecology of the area, in particular, understanding the relative contribution of inshore and offshore primary production to consumers inhabiting intertidal and shallow subtidal, coral reef, deep reef, canyon head and pelagic habitats. Seaweeds, excluding certain species of red seaweeds with highly depleted carbon signatures, and phytoplankton, such as diatoms, were found to be the principal sources of primary production for all consumers. Offshore production was typified by dinoflagellates. Particulate organic matter (POM) was spatio-temporally variable. Three distinct productivity periods related to nutrient cycling were noted with enriched carbon signatures and higher organic matter loads associated with warmer water. Inshore primary production was an important source of carbon to consumers in all habitats with the exception of zooplankton that were more reliant on pelagic primary production. Benthic invertebrates reflected a gradient in the utilisation of inshore production, due to the reduced availability of this source further offshore. Consumers at the furthest sites offshore were found to include a substantial quantity of inshore-derived production in their diets. Fishes, which are more mobile, were found to incorporate a similar proportion of inshore production into their diets regardless of where they were collected from.
- Full Text:
- Date Issued: 2013
The trophic ecology of parrotfish of Zanzibar application of stable isotope analysis
- Plass-Johnson, Jeremiah Grahm
- Authors: Plass-Johnson, Jeremiah Grahm
- Date: 2012
- Subjects: Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5789 , http://hdl.handle.net/10962/d1005477 , Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Description: Parrotfish are a critical component of the herbivore functional group on tropical coral reefs around the world because they mediate competition that occurs between algae and scleractinian corals. Also, because of their feeding technique, which consists of rasping at the substratum with their beak-like teeth, they play an important role in carbonate turnover and the clearing of reef surface area for the settlement of new sessile organisms. Because of these roles, parrotfishes are an important structuring component of coral reef communities. However, individual species can play different roles depending on their physiology, behaviour and ecology. Despite the possible ecological differences that may exist amongst species, specific roles of the fishes remain unclear as the group is most often studied at higher community levels. This thesis applied stable isotope analysis to differing levels of organisation within a parrotfish community to help elucidate their trophic ecology on coral reefs in Zanzibar. Firstly, blood and muscle tissues were compared to identify differences in their isotope signatures. In other organisms, blood turns over faster than muscle tissue so that muscle tissue represents the diet as integrated over a longer period of time. In most species of parrotfish the blood and muscle δ¹³C signatures were not found to be significantly different, but the δ¹⁵N signatures were significantly different between tissues. This indicated that the δ¹³C signature of both tissues would reveal similar dietary information. Conversely, differences in the δ¹⁵N signature indicated that the nitrogen relationship between tissues was more complicated. Secondly, spatial variability in parrotfish, coral, detritus and macroalgae isotope signatures was assessed at different scales. In macroalgae and coral tissues (zooxanthellae and polyp treated separately), the δ¹³C signatures were shown to differ with depth, presumably because of changes in photosynthetic processes related to depth-associated changes in light. While δ¹⁵N signatures were not affected by depth, all organisms showed enrichment at the Nyange reef, the closest reef to the capital of Zanzibar, Stone Town, presumably reflecting the effects of sewage outfall. These results show that processes that impact the δ¹⁵N signatures of primary producers (macroalgae and zooxanthellae) can be traced to higher trophic levels (coral polyps and fish). Lastly, δ¹³C and δ¹⁵N signatures were used to identify ontogenetic dietary changes in multiple species of parrotfish. Four of the species showed stages that varied from the diets that are normally assumed on the basis of their dentition and feeding technique. This indicates that functional roles based on taxonomy or morphology may fail to include possible ontogenetic dietary changes, and may also fail to elucidate the full impact a species could have on coral reef communities. The conclusions from these studies indicate that the species-specific ecological role of parrotfish in coral reef communities can be complex within and between species, and may differ amongst reefs. In light of the natural and anthropogenic pressures that affect coral reef systems, management decisions based on a more complete understanding of the role of these fish in coral reef communities will help decisions that maintain resilience in these fragile systems.
- Full Text:
- Date Issued: 2012
- Authors: Plass-Johnson, Jeremiah Grahm
- Date: 2012
- Subjects: Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5789 , http://hdl.handle.net/10962/d1005477 , Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Description: Parrotfish are a critical component of the herbivore functional group on tropical coral reefs around the world because they mediate competition that occurs between algae and scleractinian corals. Also, because of their feeding technique, which consists of rasping at the substratum with their beak-like teeth, they play an important role in carbonate turnover and the clearing of reef surface area for the settlement of new sessile organisms. Because of these roles, parrotfishes are an important structuring component of coral reef communities. However, individual species can play different roles depending on their physiology, behaviour and ecology. Despite the possible ecological differences that may exist amongst species, specific roles of the fishes remain unclear as the group is most often studied at higher community levels. This thesis applied stable isotope analysis to differing levels of organisation within a parrotfish community to help elucidate their trophic ecology on coral reefs in Zanzibar. Firstly, blood and muscle tissues were compared to identify differences in their isotope signatures. In other organisms, blood turns over faster than muscle tissue so that muscle tissue represents the diet as integrated over a longer period of time. In most species of parrotfish the blood and muscle δ¹³C signatures were not found to be significantly different, but the δ¹⁵N signatures were significantly different between tissues. This indicated that the δ¹³C signature of both tissues would reveal similar dietary information. Conversely, differences in the δ¹⁵N signature indicated that the nitrogen relationship between tissues was more complicated. Secondly, spatial variability in parrotfish, coral, detritus and macroalgae isotope signatures was assessed at different scales. In macroalgae and coral tissues (zooxanthellae and polyp treated separately), the δ¹³C signatures were shown to differ with depth, presumably because of changes in photosynthetic processes related to depth-associated changes in light. While δ¹⁵N signatures were not affected by depth, all organisms showed enrichment at the Nyange reef, the closest reef to the capital of Zanzibar, Stone Town, presumably reflecting the effects of sewage outfall. These results show that processes that impact the δ¹⁵N signatures of primary producers (macroalgae and zooxanthellae) can be traced to higher trophic levels (coral polyps and fish). Lastly, δ¹³C and δ¹⁵N signatures were used to identify ontogenetic dietary changes in multiple species of parrotfish. Four of the species showed stages that varied from the diets that are normally assumed on the basis of their dentition and feeding technique. This indicates that functional roles based on taxonomy or morphology may fail to include possible ontogenetic dietary changes, and may also fail to elucidate the full impact a species could have on coral reef communities. The conclusions from these studies indicate that the species-specific ecological role of parrotfish in coral reef communities can be complex within and between species, and may differ amongst reefs. In light of the natural and anthropogenic pressures that affect coral reef systems, management decisions based on a more complete understanding of the role of these fish in coral reef communities will help decisions that maintain resilience in these fragile systems.
- Full Text:
- Date Issued: 2012
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