The genetic stock structure and distribution of Chrysoblephus Puniceus, a commercially important transboundary linefish species, endemic to the South West Indian Ocean
- Authors: Duncan, Murray Ian
- Date: 2014
- Subjects: Sparidae , Fishes -- Indian Ocean , Fish populations , Fishery management , Fish stock assessment -- South Africa , Fish stock assessment -- Mozambique , Overfishing , Habitat conservation , Fishes -- Genetics , Fishes -- Climatic factors , Fishes -- Variation , Fishes -- Migration
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5360 , http://hdl.handle.net/10962/d1011868 , Sparidae , Fishes -- Indian Ocean , Fish populations , Fishery management , Fish stock assessment -- South Africa , Fish stock assessment -- Mozambique , Overfishing , Habitat conservation , Fishes -- Genetics , Fishes -- Climatic factors , Fishes -- Variation , Fishes -- Migration
- Description: Chrysoblephus puniceus is an over-exploited linefish species, endemic to the coastlines off southern Mozambique and eastern South Africa. Over-exploitation and habitat loss are two of the biggest threats to the sustainability of fisheries globally. Assessing the genetic stock structure (a prerequisite for effective management) and predicting climate related range changes will provide a better understanding of these threats to C. puniceus which can be used to improve the sustainability of the fishery. Two hundred and eighty four genetic samples were collected from eight sampling sites between Ponta da Barra in Mozambique and Coffee Bay in South Africa. The mitochondrial control region and ten microsatellite loci were amplified to analyse the stock structure of C. puniceus. The majority of microsatellite and mtDNA pairwise population comparisons were not significant (P > 0.05) although Xai Xai and Inhaca populations had some significant population comparisons for mtDNA (P < 0.05). AMOVA did not explain any significant variation at the between groups hierarchical level for any pre-defined groupings except for a mtDNA grouping which separated out Xai Xai and Inhaca from other sampling sites. SAMOVA, isolation by distance tests, structure analysis, principle component analysis and spatial autocorrelation analysis all indicated a single population of C. puniceus as being most likely. The migrate-n analysis provided evidence of current driven larval transport, with net migration rates influenced by current dynamics.Two hundred and thirty six unique presence points of C. puniceus were correlated with seasonal maximum and minimum temperature data and bathymetry to model the current distribution and predict future distribution changes of the species up until 2030. Eight individual species distribution models were developed and combined into a mean ensemble model using the Biomod2 package. Winter minimum temperature was the most important variable in determining models outputs. Overall the ensemble model was accurate with a true skills statistic score of 0.962. Binary transformed mean ensemble models predicted a northern and southern range contraction of C. puniceus' distribution of 15 percent; by 2030. The mean ensemble probability of occurrence models indicated that C. puniceus' abundance is likely to decrease off the southern Mozambique coastline but remain high off KwaZulu-Natal. The results of the genetic analysis support the theory of external recruitment sustaining the KwaZulu Natal fishery for C. puniceus. While the high genetic diversity and connectivity may make C. puniceus more resilient to disturbances, the loss of 15 percent; distribution and 11 percent; genetic diversity by 2030 will increase the species vulnerability. The decrease in abundance of C. puniceus off southern Mozambique together with current widespread exploitation levels could result in the collapse of the fishery. A single transboundary stock of C. puniceus highlights the need for co-management of the species. A combined stock assessment between South Africa and Mozambique and the development of further Marine Protected Areas off southern Mozambique are suggested as management options to minimise the vulnerability of this species.
- Full Text:
- Date Issued: 2014
Movement patterns, stock delineation and conservation of an overexploited fishery species, Lithognathus Lithognathus (Pisces: Sparidae)
- Authors: Bennett, Rhett Hamilton
- Date: 2012
- Subjects: Reef fishes -- Behavior , Endangered species -- South Africa , Fish stock assessment -- South Africa , Fishery management -- South Africa , Fish communities -- South Africa , Sparidae , Lithognathus , Lithognathus -- Growth
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5374 , http://hdl.handle.net/10962/d1015709
- Description: White steenbras Lithognathus lithognathus (Pisces: Sparidae) has been a major target species of numerous fisheries in South Africa, since the late 19th century. Historically, it contributed substantially to annual catches in commercial net fisheries, and became dominant in recreational shore catches in the latter half of the 20th century. However, overexploitation in both sectors resulted in severe declines in abundance. The ultimate collapse of the stock by the end of the last century, and the failure of traditional management measures to protect the species indicate that a new management approach for this species is necessary. The species was identified as a priority for research, management and conservation in a National Linefish Status Report. Despite knowledge on aspects of its biology and life history, little is known about juvenile habitat use patterns, home range dynamics and movement behaviour in estuaries. Similarly, the movement and migration of larger juveniles and adults in the marine environment are poorly understood. Furthermore, there is a complete lack of information on its genetic stock structure. Such information is essential for effective management of a fishery species. This thesis aimed to address the gaps in the understanding of white steenbras movement patterns and genetic stock structure, and provide an assessment of its current conservation status. The study adopted a multidisciplinary approach, incorporating a range of methods and drawing on available information, including published literature, unpublished reports and data from long-term monitoring programmes. Acoustic telemetry, conducted in a range of estuaries, showed high site fidelity, restricted area use, small home ranges relative to the size of the estuary, and a high level of residency within estuaries at the early juvenile life stage. Behaviour within estuaries was dominated by station-keeping, superimposed by a strong diel behaviour, presumably based on feeding and/or predator avoidance, with individuals entering the shallow littoral zone at night to feed, and seeking refuge in the deeper channel areas during the daytime. Conventional dart tagging and recapture data from four ongoing, long-term coastal fish tagging projects, spread throughout the distribution of this species, indicated high levels of residency in the surf zone at the late juvenile and sub-adult life stages. Consequently, juvenile and sub-adult white steenbras are vulnerable to localised depletion, although they can be effectively protected by suitably positioned estuarine protected areas (EPAs) and marine protected areas (MPAs), respectively. It has been hypothesized that adult white steenbras undertake large-scale coastal migrations between summer aggregation areas and winter spawning grounds. The scale of observed coastal movements was correlated with fish size (and age), with larger fish undertaking considerably longer-distance coastal movements than smaller individuals, supporting this hypothesis. Given the migratory behaviour of adults, and indications that limited spawning habitat exists, MPAs designed to protect white steenbras during the adult life stage should encompass all known spawning aggregation sites. The fishery is plagued by problems such as low compliance and low enforcement capacity, and alternative management measures, such as seasonal closure, need to be evaluated. Despite considerable conventional dart tagging effort around the coastline (5 782 fish tagged) with 292 recaptures there remains a lack of empirical evidence of fish migrating long distances (> 600 km) between aggregation and spawning areas. This uncertainty in the level of connectivity among coastal regions was addressed using mitochondrial DNA sequencing and genotyping of microsatellite repeat loci in the nuclear genome, which showed no evidence of major geographic barriers to gene flow in this species. Samples collected throughout the white steenbras core distribution showed high genetic diversity, low genetic differentiation and no evidence of isolation by distance or localised spawning. Although historically dominant in several fisheries, analysis of long-term commercial and recreational catch data for white steenbras indicated considerable declines and ultimately stock collapse. Improved catch-per-unit-effort in two large MPAs subsequent to closure confirmed that MPAs can be effective for the protection of white steenbras. However, the current MPA network encompasses a low proportion of sandy shoreline, for which white steenbras exhibits an affinity. Many MPAs do not prohibit recreational shore angling, which currently accounts for the greatest proportion of the total annual catch. Furthermore, EPAs within the juvenile distribution protect a negligible proportion of the total available surface area of estuaries – habitat on which white steenbras is wholly dependent. Despite some evidence of recent increases in abundance in estuaries and the surf zone in certain areas, white steenbras meets the criteria for “Endangered” on the IUCN Red List of Threatened Species, and for “Protected species” status on the National Environmental Management: Biodiversity Act of South Africa. The species requires improved management, with consideration for its life-history style, estuarine dependency, surf zone residency, predictable spawning migrations and its poor conservation status. The multidisciplinary approach provides valuable information towards an improved scientific basis for the management of white steenbras and a framework for research that can be adopted for other overexploited, estuarine-associated coastal fishery species.
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- Date Issued: 2012
The challenge of applying systematic conservation planning to the marine environment using expert knowledge (focus: Sparidae)
- Authors: Bause, Mariëtte
- Date: 2004
- Subjects: Marine parks and reserves -- South Africa , Nature conservation -- South Africa , Fishery conservation -- South Africa , Sparidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:11064 , http://hdl.handle.net/10948/343 , Marine parks and reserves -- South Africa , Nature conservation -- South Africa , Fishery conservation -- South Africa , Sparidae
- Description: Although the marine environment has generally been considered to be less in need of attention from conservationists, politicians and managers than the terrestrial environment, there has been an increasing appreciation that there is little left in the marine environment that can be considered unaltered by humans. Conservation action is therefore urgently needed to protect marine populations, species and environments from anthropogenic pressures. Since overharvesting seems to be the main cause of the collapse in coastal ecosystems, areas need to be protected so that stocks can recover. However, the proclamation of such marine protected areas (MPAs) need to be well planned to ensure that species are well represented and that their biological requirements are met in the long term. While terrestrial conservation planners have started to incorporate biological, social and economic information into so-called systematic conservation plans, marine planners have been more hesitant to use these approaches due to the greater openness of the ocean (with the associated greater dispersal of marine organisms and propogules, lower levels of endemism, and lack of ownership) and the paucity of available information. The current study aimed to investigate the applicability of systematic approaches to the process of selecting sites for a network of potential replenishment zones for seabream species that could supplement protection already afforded by existing no-fishing reserves. Since many of these seabream species are popular targets in both the recreational and commercial linefishery sectors, they have been overexploited and are in need of additional protection. Information on these species and the diversity of their associated reefs were obtained through consultations with scientists, managers and resource-users (namely SCUBA divers, spearfishers as well as recreational and commercial fishers). These data were obtained during workshops where Participatory Rural Appraisal (PRA) scoring and mapping methods were applied. Although ordinal-scale, rather than interval-or ratio-scale data were obtained, these data could be used in an interactive selection process. Because these methods require relatively cheap materials and few personnel, they could be used to collect information where limited budgets are available. Quantitative targets for the protection of individual species were set on the basis of their status in the Marine Living Resource Act, since this reflected their different requirements for protection. A preliminary investigation indicated that the current no-fishing reserves effectively achieved most of these goals for seabream species. The selection of sites for the replenishment network was based on irreplaceability analyses, while decisions between sites with lower irreplaceability values were based on explicit design rules. A total of 26 sites were required to achieve targets for all species. These replenishment zones could potentially be established, managed and monitored by voluntary community groups. This study therefore indicated that systematic conservation planning can successfully be applied to the marine environment, while the involvement of stakeholders is crucial to ensure that conservation action is supported.
- Full Text:
- Date Issued: 2004
Investigations into the larval rearing of two South African sparid species
- Authors: Davis, Jerome Adam
- Date: 1997
- Subjects: Sparidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5293 , http://hdl.handle.net/10962/d1005138 , Sparidae
- Description: The most significant bottleneck to the development of marine finfish culture is a reliable production of juveniles for growout. This is due to the small size at hatch and delicate nature of the pelagic larvae produced by most commercially desirable species. However, over the last 30 years, improved larviculture techniques have been developed to the extent that many species are being successfully cultured worldwide. These techniques were applied to two endemic species as a preliminary step towards establishing marine finfish aquaculture in South Africa. Adult roman Chtysoblephus laticeps and carpenter Argyrozona argyrozona (Pisces: Sparidae) were caught in the Tsitsikamma National Park. Both species responded to injection with pituitary extract, HCG and LHRHa, and were succesfully stripped up to 48 hours after injection. Fish were stripped twice, the second stripping producing better quality eggs. Chyrysoblephus laticeps also spawned naturally after injection with LHRHa. The fertilised eggs were incubated and the larvae reared in a fully recirculating seawater system. One batch of A. argyrozona and three batches of C. laticeps were reared through metamorphosis on a diet of enriched rotifers and Anemia, and inert foods, following commonly used rearing procedures. Both species followed developmental patterns of other cultured larvae, displaying typical critical stages; high mortalities at first-feeding and cannibalism from 26-30 days after hatch resulted in survival rates ranging from 0.1-0.5%. Growth, survival, size of gape at first-feeding, and ease of weaning onto an inert diet of C. laticeps was comparable to other species being reared for the first time, indicating some potential as a candidate species. The numbers of A. argyrozona larvae reared were insufficient to make comparisons with other studies. The adults also proved to be susceptible to physical damage while in captivity and were, therefore, considered unsuitable for aquaculture. The thesis describes the spawning procedure, the systems developed and the larval rearing process. The critical stages of first-feeding, swim bladder inflation, settlement and cannibalism are discussed and the development of the larvae described. The ontogeny of both species is described in detail. Both species displayed typical sparid developmental patterns, but differed with respect to pigmentation, head spination and morphometrics.
- Full Text:
- Date Issued: 1997
Aspects of the biology of two inshore sparid fishes (Diplodus sargus capensis and Diplodus cervinus hottentotus) off the south-east coast of South Africa
- Authors: Mann, Bruce Quintin
- Date: 1992
- Subjects: Sparidae , Diplodus
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5222 , http://hdl.handle.net/10962/d1005065 , Sparidae , Diplodus
- Description: The blacktail, Diplodus sargus capensis and the zebra, Diplodus cervinus hottentotus, sparid fishes endemic to South Africa, are important components of the recreational shore-fishery. To provide a basis for the management of these fish, aspects of the biology of both species were investigated in the Tsitsikamma National Park (TNP). In particular, the role of the TNP was evaluated as a management option for the conservation of both species. Examination of stomach contents showed that juveniles of both species fed predominantly on amphipods, polychaetes and harpacticoid copepods. Adult !h. sargus were omnivorous and fed opportunistically on a wide variety of reef associated invertebrates and algae including echinoids, polychaetes, anthozoans, ascidians and rhodophytes. The diet of adult D. cervinus was more specialized with a preference shown for polychaetes and amphipods. Seasonal differences were apparent in the diets of both species where considerably more amphipods were consumed in winter than in summer. Feeding requirements of both species were reflected in their habitat preferences. Visual underwater assessment revealed that both species were most abundant on turbulent inshore reefs (1-10m). !h. sargus were observed over a wide variety of reef associated habitats. In the literature they have also been recorded in the surf zone of sandy beaches and in the lower reaches of estuaries. !h. cervinus, on the other hand, were more specific in their habitat requirements and were observed in greatest abundance on inshore reefs, often in close association with caves or overhangs. A comparison between the relative abundance and size structure of both species in the TNP with that of an exploited area immediately adjacent to the reserve, showed no significant differences. This was attributed to the low level of exploitation by rock-and-surf anglers occurring in the exploited study area, as well as the possibility of seeding of eggs and larvae, or emigration of adults from the TNP. An investigation of the reproductive biology of both fish showed that !h. sargus had an extended summer spawning season while in !h. cervi nus it was more restricted. Detailed histological examination of gonadal development showed that !h. sarqus were dygynous with partial protandry occuring in the male population. ~ cervinus were shown to be rudimentary hermaphrodites. Size at 50% maturity in ~ sargus and ~ cervinus was determined at 225 and 285mm fork length respectively, corresponding to ages of 4 and 6 years. An age and growth study based on the examination of sectioned otoliths showed that both species were slow growing capable of reaching ages in excess of 20 years. Growth in ~ sargus and ~ cervinus was described by the von Bertalanffy growth equations: L(t) = 309.44(1-e-0 . 247[t+l. 048 l) and L(t) = 396.85(1-e-0.146[t+2.148J) respectively. Life history characteristics of D. sargus and D. cervinus including slow growth, late maturation and occupation of a localised, demersal habitat showed that both species were vulnerable to the effects of over-fishing. Due to the present increase in the number of participants and the decrease in catch per unit effort in the recreational shore-fishery, more stringent management recommendations were proposed to ensure the adequate protection of both species. These included an increased minimum size limit and a decreased bag limit for both species. Based on the residency shown by both species and their high relative abundance in the TNP, marine reserves were considered to be a valuable addition to the suite of management options available for the conservation of these species . In this respect the reserve provided both protection for the spawner stock as well as the potential to seed adjacent areas.
- Full Text:
- Date Issued: 1992
The growth characteristics of sparid otoliths
- Authors: Lang, Judy Brenda
- Date: 1992
- Subjects: Fishes -- Age determination , Otoliths , Sparidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5285 , http://hdl.handle.net/10962/d1005129 , Fishes -- Age determination , Otoliths , Sparidae
- Description: The periodicity of formation of growth increments in the otoliths of South African sparids was validated by the oxytetracycline labelling technique. Intramuscular injections of oxytetracycline at a dosage of 250mg/kg marked the otoliths of laboratory held juvenile sparids, while a dosage range of 50 - 100mg/kg oxytetracycline, injected intramuscularly, marked adult sparids in the field. Laboratory held, larval sparid otoliths were marked by immersion for 24hrs a solution of 100-150mg/l alizarin complexone. Both daily (microstructural) and annual (macrostructural) growth increments were identified in the otoliths. The micro incremental pattern of deposition in the sparid otoliths conformed to the general pattern of otolith structure. Sparid otoliths consisted of a central opaque nucleus composed of multiple primordia. surrounding this nucleus were daily increments which decreased in width as the distance from the nucleus increased. Both check rings and subdaily increments were visible throughout the otolith. Minor environmental changes did not affect micro incremental deposition. Narrow opaque and wide hyaline annual growth zones were identified in sectioned sparid otoliths. Scanning electron microscope analysis of the annual growth zones revealed that microincrements within the opaque zone were narrowly spaced with prominent discontinuous phases. This resulted in the greater optical density and higher protein content of the zone. The hyaline zone was composed of widely spaced daily increments with prominent incremental phases accounting for the translucent nature of this zone. Opaque zone formation in the otoliths of many South African sparids was found to occur primarily during periods of reproductive activity and was shown to be indicative of slow otolith growth. The hyaline zone was formed after the spawning season, representative of fast otolith growth. The results of this study have resolved much of the controversy surrounding the rate of growth and time of formation of the opaque and hyaline growth zones in South African sparid otoliths.
- Full Text:
- Date Issued: 1992