Diurnal and nocturnal activity patterns and habitat use of Algoa Bay’s rocky reef fish community
- Authors: Juby, Roxanne
- Date: 2017
- Subjects: Reef fishes -- Effect of light on , Reef fishes -- South Africa , Underwater videography in wildlife monitoring -- South Africa -- Tsitsikamma
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/44827 , vital:25445
- Description: Distinct day-night changes in ambient light are recognised as an important driver of animal activity patterns, with predictable changes to the structure and composition of animal communities between day and night. While day-night variation in the structure of animal communities has been well researched for terrestrial organisms and shallow marine fish communities around the world, there has been limited research of this type conducted on South Africa’s rocky reef fish communities. Consequently, we have a poor understanding of how nocturnal reef fish communities are structured and the day-night activity patterns of species inhabiting both shallow (10-30m) and deep-aphotic (55-100m) reefs. This research was conducted at two warm-temperate South African rocky reefs situated in Algoa Bay. The importance of natural ambient light in shaping the distribution of reef fish communities at shallow and deep-aphotic reef sites was demonstrated using baited remote underwater stereo-video systems (stereo-BRUVs). Distinct day and night fish communities were sampled at shallow and deep-aphotic reef sites. These differences were driven by significant changes in species richness (p < 0.001), species abundance (p < 0.001) and community composition (p < 0.001). These shifts appeared to be driven by day-night activity patterns that were the result of increased detectability of certain species at either day or night. The majority of species belonging to the family Sparidae showed evidence of strict diurnal activity, with their activity being further restricted to shallow reefs. These species showed evidence that they may enter micro-habitats within the reef at night. Similar activity patterns were shown for other top predatory teleost species and low level consumers, with substantial reductions in abundances, or no recordings at night throughout this study. Shallow reefs at day harboured the most diverse fish community. It is therefore hypothesised that this habitat was associated with conditions that offered improved access to resources for many visual species. In addition, the diverse community inhabiting shallow reefs at day is associated with a high risk of negative interspecies interactions, such as competition and predation. It is hypothesised that the biotic conditions associated with shallow reefs at day drove three movement patterns identified in this study; Pagellus bellottii natalensis showed evidence of movement onto shallow reefs at night from adjacent sandy flats, while Pterogymnus laniarius and Squalus sp. 1 showed evidence of movement onto shallow reefs at night from the deep- aphotic reefs that remain dark throughout the diel cycle. It is further hypothesised that other species which showed evidence for nocturnal activity, i.e. Galeichthys ater, Eptatretus hexatrema and Haploblepharus edwardsii, may enter sheltered micro-habitats within the reef during day light hours. These findings have highlighted the complex patterns that have evolved within marine fish to allow multiple species to coexist and exploit productive reef ecosystems by partitioning resource use and activity patterns at day or night, between depth zones and habitat types.
- Full Text:
- Date Issued: 2017
- Authors: Juby, Roxanne
- Date: 2017
- Subjects: Reef fishes -- Effect of light on , Reef fishes -- South Africa , Underwater videography in wildlife monitoring -- South Africa -- Tsitsikamma
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/44827 , vital:25445
- Description: Distinct day-night changes in ambient light are recognised as an important driver of animal activity patterns, with predictable changes to the structure and composition of animal communities between day and night. While day-night variation in the structure of animal communities has been well researched for terrestrial organisms and shallow marine fish communities around the world, there has been limited research of this type conducted on South Africa’s rocky reef fish communities. Consequently, we have a poor understanding of how nocturnal reef fish communities are structured and the day-night activity patterns of species inhabiting both shallow (10-30m) and deep-aphotic (55-100m) reefs. This research was conducted at two warm-temperate South African rocky reefs situated in Algoa Bay. The importance of natural ambient light in shaping the distribution of reef fish communities at shallow and deep-aphotic reef sites was demonstrated using baited remote underwater stereo-video systems (stereo-BRUVs). Distinct day and night fish communities were sampled at shallow and deep-aphotic reef sites. These differences were driven by significant changes in species richness (p < 0.001), species abundance (p < 0.001) and community composition (p < 0.001). These shifts appeared to be driven by day-night activity patterns that were the result of increased detectability of certain species at either day or night. The majority of species belonging to the family Sparidae showed evidence of strict diurnal activity, with their activity being further restricted to shallow reefs. These species showed evidence that they may enter micro-habitats within the reef at night. Similar activity patterns were shown for other top predatory teleost species and low level consumers, with substantial reductions in abundances, or no recordings at night throughout this study. Shallow reefs at day harboured the most diverse fish community. It is therefore hypothesised that this habitat was associated with conditions that offered improved access to resources for many visual species. In addition, the diverse community inhabiting shallow reefs at day is associated with a high risk of negative interspecies interactions, such as competition and predation. It is hypothesised that the biotic conditions associated with shallow reefs at day drove three movement patterns identified in this study; Pagellus bellottii natalensis showed evidence of movement onto shallow reefs at night from adjacent sandy flats, while Pterogymnus laniarius and Squalus sp. 1 showed evidence of movement onto shallow reefs at night from the deep- aphotic reefs that remain dark throughout the diel cycle. It is further hypothesised that other species which showed evidence for nocturnal activity, i.e. Galeichthys ater, Eptatretus hexatrema and Haploblepharus edwardsii, may enter sheltered micro-habitats within the reef during day light hours. These findings have highlighted the complex patterns that have evolved within marine fish to allow multiple species to coexist and exploit productive reef ecosystems by partitioning resource use and activity patterns at day or night, between depth zones and habitat types.
- Full Text:
- Date Issued: 2017
Optimisation of a sampling protocol for long-term monitoring of temperate reef fishes
- Authors: Bennett, Rhett Hamilton
- Date: 2008
- Subjects: Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5309 , http://hdl.handle.net/10962/d1005154 , Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Description: Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. The methods were incorporated in a proposed sampling protocol, and evaluated. The methods were able to detect known differences between protected and exploited communities. It is recommended that LTM within protected areas, for detection of natural change, be focused on community-level indicators, while LTM in exploited areas, aimed at detection of anthropogenic change, be focused on species-level indicators. The proposed protocol with standardised methods will allow for comparisons across a network of LTM sites and provide the opportunity for a broad-scale assessment of the effects of environmental variables on reef fish stocks. The protocol developed in this study has application in other biogeographical regions in South Africa, and other parts of the world. Shift in the focus of much marine research, in South Africa and elsewhere, to LTM, highlights the relevance and timeous nature of this study.
- Full Text:
- Date Issued: 2008
- Authors: Bennett, Rhett Hamilton
- Date: 2008
- Subjects: Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5309 , http://hdl.handle.net/10962/d1005154 , Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Description: Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. The methods were incorporated in a proposed sampling protocol, and evaluated. The methods were able to detect known differences between protected and exploited communities. It is recommended that LTM within protected areas, for detection of natural change, be focused on community-level indicators, while LTM in exploited areas, aimed at detection of anthropogenic change, be focused on species-level indicators. The proposed protocol with standardised methods will allow for comparisons across a network of LTM sites and provide the opportunity for a broad-scale assessment of the effects of environmental variables on reef fish stocks. The protocol developed in this study has application in other biogeographical regions in South Africa, and other parts of the world. Shift in the focus of much marine research, in South Africa and elsewhere, to LTM, highlights the relevance and timeous nature of this study.
- Full Text:
- Date Issued: 2008
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